Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | B0O44_10168 | Not Available | Negative | 107672 - 108352 | 25294.1 |
| thiol-disulfide isomerase/thioredoxin | B0O44_10169 | Not Available | Negative | 108357 - 108869 | 19227.5 |
| hypothetical protein | B0O44_10170 | Not Available | Positive | 109029 - 109568 | 20667.9 |
| hypothetical protein | B0O44_10171 | Not Available | Negative | 109598 - 109813 | 8497.92 |
| lysyl-trna synthetase class ii | B0O44_10172 | Not Available | Negative | 109899 - 111620 | 65515.8 |
| long-chain acyl-coa synthetase | B0O44_10173 | Not Available | Negative | 111745 - 113658 | 71823.9 |
| iron-sulfur cluster assembly protein | B0O44_10174 | Not Available | Negative | 113756 - 114082 | 11870.8 |
| nitrogen fixation nifu-like protein | B0O44_10175 | Not Available | Negative | 114118 - 114531 | 14892.8 |
| cysteine desulfurase iscs | B0O44_10176 | Not Available | Negative | 114583 - 115794 | 44311.3 |
| methylmalonyl-coa epimerase | B0O44_10177 | Not Available | Positive | 115918 - 116331 | 15156.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

