Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor for ferrienterochelin and colicins | B0O44_101780 | Not Available | Negative | 909508 - 911874 | 87733.4 |
| iron complex transport system substrate-binding protein | B0O44_101781 | Not Available | Positive | 912221 - 913048 | 29586.5 |
| iron complex transport system permease protein | B0O44_101782 | Not Available | Positive | 913042 - 914088 | 36446.6 |
| iron complex transport system atp-binding protein | B0O44_101783 | Not Available | Positive | 914090 - 914896 | 30012.6 |
| hypothetical protein | B0O44_101784 | Not Available | Positive | 914911 - 915045 | 5156.66 |
| signal transduction histidine kinase | B0O44_101785 | Not Available | Positive | 915307 - 916593 | 48437.6 |
| hypothetical protein | B0O44_101786 | Not Available | Negative | 916683 - 917297 | 23544.4 |
| lyttr family two component transcriptional regulator | B0O44_101787 | Not Available | Negative | 917423 - 918187 | 29117.2 |
| histidine kinase | B0O44_101788 | Not Available | Negative | 918187 - 919257 | 40975.6 |
| acyl-coa hydrolase | B0O44_101789 | Not Available | Positive | 919422 - 920024 | 22284.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

