Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor protein involved in fe transport | B0O44_101760 | Not Available | Negative | 886510 - 888921 | 90506.9 |
| signal transduction histidine kinase | B0O44_101761 | Not Available | Negative | 888999 - 890300 | 50109.6 |
| dna-binding response ompr family regulator | B0O44_101762 | Not Available | Negative | 890297 - 890971 | 25612.9 |
| atp-binding cassette subfamily b protein | B0O44_101763 | Not Available | Negative | 891030 - 892772 | 64594.7 |
| atp-binding cassette subfamily b protein | B0O44_101764 | Not Available | Negative | 892799 - 894550 | 65318.4 |
| arac-like dna-binding protein | B0O44_101765 | Not Available | Positive | 894678 - 895670 | 37883.8 |
| hypothetical protein | B0O44_101766 | Not Available | Negative | 895723 - 896889 | 44587.0 |
| outer membrane protein assembly factor bamb | B0O44_101767 | Not Available | Negative | 897006 - 898313 | 48897.8 |
| lyttr family two component transcriptional regulator | B0O44_101768 | Not Available | Negative | 898424 - 899191 | 29034.4 |
| histidine kinase | B0O44_101769 | Not Available | Negative | 899194 - 900291 | 41517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

