Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | B0O44_101750 | Not Available | Negative | 877116 - 877484 | 13427.0 |
| putative dna helicase | B0O44_101751 | Not Available | Negative | 877494 - 879404 | 70807.0 |
| hypothetical protein | B0O44_101752 | Not Available | Negative | 879413 - 879796 | 14552.8 |
| phosphatidylinositol 3-/4-kinase | B0O44_101753 | Not Available | Negative | 879774 - 880571 | 29969.0 |
| rimj/riml family protein n-acetyltransferase | B0O44_101754 | Not Available | Positive | 880627 - 881127 | 18838.5 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_101755 | Not Available | Negative | 881209 - 882378 | 43529.6 |
| histidine kinase | B0O44_101756 | Not Available | Positive | 882656 - 883708 | 40690.2 |
| lyttr family two component transcriptional regulator | B0O44_101757 | Not Available | Positive | 883705 - 884430 | 27489.7 |
| arac-like dna-binding protein | B0O44_101758 | Not Available | Positive | 884480 - 885388 | 34489.9 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | B0O44_101759 | Not Available | Positive | 885469 - 886470 | 36475.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

