Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101720 | Not Available | Negative | 843806 - 844270 | 17652.6 |
| hypothetical protein | B0O44_101721 | Not Available | Positive | 844427 - 845773 | 50585.8 |
| membrane protease subunit (stomatin/prohibitin family) | B0O44_101722 | Not Available | Positive | 845779 - 846783 | 37410.1 |
| hypothetical protein | B0O44_101723 | Not Available | Positive | 846791 - 847027 | 9126.59 |
| exodeoxyribonuclease vii small subunit | B0O44_101724 | Not Available | Negative | 847024 - 847233 | 7912.48 |
| exodeoxyribonuclease vii large subunit | B0O44_101725 | Not Available | Negative | 847233 - 848585 | 50807.3 |
| hypothetical protein | B0O44_101726 | Not Available | Positive | 848676 - 848900 | 8233.71 |
| pap2 superfamily protein | B0O44_101727 | Not Available | Negative | 848901 - 849839 | 35794.0 |
| fatty acid hydroxylase family protein | B0O44_101728 | Not Available | Negative | 849832 - 850461 | 24365.8 |
| phosphatidylglycerophosphate synthase | B0O44_101729 | Not Available | Negative | 850553 - 851845 | 48227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

