Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | B0O44_101710 | Not Available | Positive | 835408 - 837318 | 72975.7 |
| putative mfs family arabinose efflux permease | B0O44_101711 | Not Available | Positive | 837422 - 838588 | 42156.3 |
| methyltransferase family protein | B0O44_101712 | Not Available | Negative | 838566 - 839234 | 24546.4 |
| hypothetical protein | B0O44_101713 | Not Available | Positive | 839317 - 839631 | 11757.3 |
| hypothetical protein | B0O44_101714 | Not Available | Positive | 839633 - 839968 | 12177.3 |
| glutathionylspermidine synthase | B0O44_101715 | Not Available | Positive | 839993 - 841126 | 43976.3 |
| vit1/ccc1 family predicted fe2+/mn2+ transporter | B0O44_101716 | Not Available | Negative | 841123 - 841809 | 24751.7 |
| arac-like dna-binding protein | B0O44_101717 | Not Available | Positive | 842079 - 842951 | 34279.9 |
| hypothetical protein | B0O44_101718 | Not Available | Positive | 842953 - 843381 | 16419.0 |
| response regulator receiver domain-containing protein | B0O44_101719 | Not Available | Positive | 843446 - 843814 | 13692.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

