Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | B0O44_101670 | Not Available | Negative | 795869 - 796708 | 33210.3 |
| outer membrane receptor protein involved in fe transport | B0O44_101671 | Not Available | Negative | 796750 - 799212 | 90991.0 |
| carboxylesterase type b | B0O44_101672 | Not Available | Positive | 799415 - 800983 | 58652.1 |
| hypothetical protein | B0O44_101673 | Not Available | Negative | 801025 - 801651 | 24205.5 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | B0O44_101674 | Not Available | Negative | 801736 - 802125 | 14724.7 |
| crp-like camp-binding protein | B0O44_101675 | Not Available | Negative | 802219 - 802782 | 22091.0 |
| yxwgxw repeat-containing protein | B0O44_101676 | Not Available | Negative | 802882 - 803889 | 37478.9 |
| hypothetical protein | B0O44_101677 | Not Available | Negative | 803995 - 804852 | 31537.3 |
| hypothetical protein | B0O44_101678 | Not Available | Negative | 805008 - 805448 | 15697.2 |
| putative hicb family rnase h-like nuclease | B0O44_101679 | Not Available | Negative | 805528 - 805902 | 13904.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

