Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | B0O44_101640 | Not Available | Negative | 769861 - 771114 | 48397.3 |
| outer membrane receptor protein involved in fe transport | B0O44_101641 | Not Available | Positive | 771249 - 773642 | 90500.2 |
| istb-like atp binding protein | B0O44_101642 | Not Available | Positive | 773748 - 774800 | 39679.1 |
| regulatory luxr family protein | B0O44_101643 | Not Available | Negative | 774797 - 775534 | 28054.8 |
| hypothetical protein | B0O44_101644 | Not Available | Negative | 775920 - 776285 | 13976.7 |
| atp-binding cassette subfamily b protein | B0O44_101645 | Not Available | Negative | 776334 - 778508 | 80483.8 |
| hypothetical protein | B0O44_101646 | Not Available | Negative | 778958 - 779635 | 25897.8 |
| rhomboid family protein | B0O44_101647 | Not Available | Positive | 779780 - 780433 | 25417.8 |
| hypothetical protein | B0O44_101648 | Not Available | Negative | 780447 - 780632 | 6366.74 |
| transcriptional regulator with xre-family hth domain | B0O44_101649 | Not Available | Positive | 780754 - 781074 | 12258.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

