Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa hydrolase | B0O44_101630 | Not Available | Negative | 759828 - 760214 | 14443.5 |
| hypothetical protein | B0O44_101631 | Not Available | Negative | 760356 - 760535 | 6500.84 |
| hypothetical protein | B0O44_101632 | Not Available | Positive | 760737 - 761744 | 36401.8 |
| fatty acid hydroxylase family protein | B0O44_101633 | Not Available | Positive | 761745 - 762575 | 31861.8 |
| czca family heavy metal efflux pump | B0O44_101634 | Not Available | Negative | 762587 - 765604 | 110321.0 |
| hlyd family secretion protein | B0O44_101635 | Not Available | Negative | 765607 - 766503 | 32040.7 |
| outer membrane protein tolc | B0O44_101636 | Not Available | Negative | 766541 - 767803 | 48522.3 |
| pap2 superfamily protein | B0O44_101637 | Not Available | Negative | 767790 - 768569 | 28478.1 |
| putative pepsy-like beta-lactamase-inhibitor | B0O44_101638 | Not Available | Negative | 768574 - 768996 | 15300.5 |
| pap2 superfamily protein | B0O44_101639 | Not Available | Negative | 769069 - 769842 | 28067.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

