Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dehydrogenase | B0O44_101620 | Not Available | Negative | 745748 - 747100 | 50487.5 |
| hypothetical protein | B0O44_101621 | Not Available | Negative | 747163 - 747765 | 22307.9 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101622 | Not Available | Positive | 748196 - 751330 | 114378.0 |
| putative outer membrane starch-binding protein | B0O44_101623 | Not Available | Positive | 751357 - 752844 | 56618.2 |
| laci family transcriptional regulator | B0O44_101624 | Not Available | Positive | 752957 - 753985 | 38434.5 |
| ser/thr protein kinase rdoa (mazf antagonist) | B0O44_101625 | Not Available | Positive | 754067 - 755110 | 40257.4 |
| ghkl domain-containing protein | B0O44_101626 | Not Available | Positive | 755177 - 756277 | 43244.3 |
| histidine kinase | B0O44_101627 | Not Available | Positive | 756280 - 757365 | 42374.9 |
| g3e family gtpase | B0O44_101628 | Not Available | Negative | 757322 - 758323 | 37287.3 |
| bleomycin hydrolase | B0O44_101629 | Not Available | Positive | 758561 - 759757 | 44483.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

