Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_101599 | Not Available | Positive | 723165 - 723785 | 24341.4 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductase | B0O44_101600 | Not Available | Negative | 723822 - 725045 | 45597.0 |
| hypothetical protein | B0O44_101601 | Not Available | Negative | 725197 - 725688 | 19247.5 |
| sigma-70-like protein | B0O44_101602 | Not Available | Negative | 725675 - 726136 | 18212.9 |
| uncharacterized protein duf5025 | B0O44_101603 | Not Available | Positive | 726388 - 726960 | 21869.5 |
| elaa protein | B0O44_101604 | Not Available | Negative | 727136 - 727588 | 17045.8 |
| nadph:quinone reductase-like zn-dependent oxidoreductase | B0O44_101605 | Not Available | Positive | 727857 - 728828 | 34347.1 |
| hae1 family hydrophobic/amphiphilic exporter-1 | B0O44_101606 | Not Available | Negative | 728936 - 732073 | 113207.0 |
| putative protein-disulfide isomerase | B0O44_101607 | Not Available | Positive | 732324 - 732950 | 23692.4 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101608 | Not Available | Positive | 733249 - 736335 | 112907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

