Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-associated phospholipid phosphatase | B0O44_101589 | Not Available | Positive | 711143 - 711817 | 25313.7 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | B0O44_101590 | Not Available | Positive | 711824 - 713356 | 57315.4 |
| putative 3-demethylubiquinone-9 3-methyltransferase (glyoxalase superfamily) | B0O44_101591 | Not Available | Positive | 713500 - 714342 | 31138.9 |
| hypothetical protein | B0O44_101592 | Not Available | Positive | 714461 - 715774 | 50028.4 |
| peroxiredoxin | B0O44_101593 | Not Available | Positive | 715877 - 716347 | 17505.8 |
| thioredoxin-like protein | B0O44_101594 | Not Available | Positive | 716358 - 716879 | 19187.3 |
| glycosyl hydrolase family 63 | B0O44_101595 | Not Available | Positive | 716902 - 719511 | 100853.0 |
| hypothetical protein | B0O44_101596 | Not Available | Positive | 719508 - 720065 | 21267.8 |
| signal transduction histidine kinase | B0O44_101597 | Not Available | Positive | 720202 - 722151 | 73579.8 |
| arac-like dna-binding protein | B0O44_101598 | Not Available | Negative | 722199 - 723062 | 33782.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

