Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system porp/sprf family membrane protein | B0O44_10148 | Not Available | Positive | 87746 - 88756 | 37902.1 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | B0O44_10149 | Not Available | Negative | 88761 - 90233 | 56671.2 |
| large conductance mechanosensitive channel | B0O44_10150 | Not Available | Positive | 90490 - 90921 | 15162.1 |
| putative iron-regulated protein | B0O44_10151 | Not Available | Negative | 90923 - 91798 | 32775.4 |
| cell wall-active antibiotic response 4tms protein yvqf | B0O44_10152 | Not Available | Positive | 92144 - 92983 | 31163.6 |
| uncharacterized protein duf4288 | B0O44_10153 | Not Available | Positive | 92994 - 93347 | 13478.0 |
| histidine kinase | B0O44_10154 | Not Available | Positive | 93351 - 94409 | 40109.4 |
| lyttr family two component transcriptional regulator | B0O44_10155 | Not Available | Positive | 94387 - 95124 | 28019.0 |
| ribonuclease p protein component | B0O44_10156 | Not Available | Positive | 95489 - 95887 | 15400.0 |
| hypothetical protein | B0O44_10157 | Not Available | Positive | 95874 - 96104 | 8635.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

