Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | B0O44_101579 | Not Available | Positive | 702102 - 702593 | 18525.7 |
| hypothetical protein | B0O44_101580 | Not Available | Positive | 702547 - 703479 | 35071.0 |
| pectate lyase | B0O44_101581 | Not Available | Positive | 703749 - 704870 | 39292.2 |
| uncharacterized protein duf1963 | B0O44_101582 | Not Available | Negative | 704955 - 705647 | 26747.2 |
| hypothetical protein | B0O44_101583 | Not Available | Positive | 705776 - 706264 | 18853.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | B0O44_101584 | Not Available | Positive | 706697 - 707356 | 24358.7 |
| hypothetical protein | B0O44_101585 | Not Available | Negative | 707359 - 708036 | 25883.2 |
| crp-like camp-binding protein | B0O44_101586 | Not Available | Negative | 708107 - 708694 | 22516.9 |
| proline iminopeptidase | B0O44_101587 | Not Available | Negative | 708696 - 709646 | 35720.7 |
| hypothetical protein | B0O44_101588 | Not Available | Negative | 709834 - 710943 | 42863.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

