Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug/metabolite transporter (dmt)-like permease | B0O44_101569 | Not Available | Positive | 692967 - 693860 | 31269.3 |
| uncharacterized protein duf4440 | B0O44_101570 | Not Available | Negative | 693881 - 694267 | 14276.2 |
| hypothetical protein | B0O44_101571 | Not Available | Negative | 694288 - 695241 | 36936.1 |
| hypothetical protein | B0O44_101572 | Not Available | Positive | 695372 - 696103 | 26545.1 |
| helix-turn-helix protein | B0O44_101573 | Not Available | Positive | 696251 - 697372 | 43006.9 |
| amp-activated protein kinase-like protein | B0O44_101574 | Not Available | Positive | 697452 - 698876 | 54252.1 |
| metallo-beta-lactamase class b | B0O44_101575 | Not Available | Negative | 698885 - 699832 | 35810.3 |
| methyltransferase family protein | B0O44_101576 | Not Available | Negative | 699829 - 700443 | 23315.8 |
| arac-like dna-binding protein | B0O44_101577 | Not Available | Negative | 700554 - 701411 | 33480.4 |
| hypothetical protein | B0O44_101578 | Not Available | Negative | 701430 - 701924 | 18530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

