Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional mocr family regulator | B0O44_101559 | Not Available | Positive | 678432 - 679853 | 53005.4 |
| amidohydrolase | B0O44_101560 | Not Available | Positive | 680006 - 681280 | 48052.1 |
| catalase-peroxidase | B0O44_101561 | Not Available | Negative | 681402 - 683678 | 83406.8 |
| hypothetical protein | B0O44_101562 | Not Available | Negative | 683831 - 684250 | 16147.5 |
| putative zn-dependent protease duf2268 | B0O44_101563 | Not Available | Negative | 684324 - 685670 | 51449.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_101564 | Not Available | Positive | 685898 - 686395 | 19463.2 |
| fecr family protein | B0O44_101565 | Not Available | Positive | 686532 - 687524 | 37902.6 |
| iron complex outermembrane receptor protein | B0O44_101566 | Not Available | Positive | 687609 - 690326 | 98951.6 |
| putative iron-regulated membrane protein | B0O44_101567 | Not Available | Positive | 690307 - 691440 | 43113.5 |
| dna-binding transcriptional mocr family regulator | B0O44_101568 | Not Available | Negative | 691443 - 692867 | 52386.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

