Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zinc-type alcohol dehydrogenase-like protein | B0O44_101539 | Not Available | Positive | 654031 - 655071 | 37420.9 |
| putative membrane protein | B0O44_101540 | Not Available | Positive | 655240 - 655605 | 13943.9 |
| phospho-acceptor domain-containing protein | B0O44_101541 | Not Available | Negative | 655602 - 657743 | 80561.8 |
| tetratricopeptide repeat protein | B0O44_101542 | Not Available | Negative | 657905 - 659317 | 53643.7 |
| Trna-lys | Not Available | Not Available | Positive | 659646 - 659721 | Not Available |
| hypothetical protein | B0O44_101544 | Not Available | Positive | 660245 - 661114 | 34056.0 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | B0O44_101545 | Not Available | Negative | 661248 - 661685 | 16753.2 |
| nudix domain-containing protein | B0O44_101546 | Not Available | Positive | 661874 - 662272 | 15277.2 |
| cu2+-exporting atpase | B0O44_101547 | Not Available | Negative | 662439 - 664610 | 78125.4 |
| copa family copper-resistance protein | B0O44_101548 | Not Available | Negative | 664629 - 666911 | 87270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

