Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybgc/ybaw family acyl-coa thioester hydrolase | B0O44_101529 | Not Available | Positive | 641846 - 642418 | 21934.8 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | B0O44_101530 | Not Available | Positive | 642549 - 643313 | 27372.8 |
| arac-like dna-binding protein | B0O44_101531 | Not Available | Positive | 643342 - 644247 | 34709.6 |
| iron-binding cdgsh zinc finger protein | B0O44_101532 | Not Available | Positive | 644367 - 644588 | 7841.29 |
| abc-2 type transport system permease protein | B0O44_101533 | Not Available | Negative | 644655 - 648350 | 140944.0 |
| abc-type multidrug transport system atpase subunit | B0O44_101534 | Not Available | Negative | 648357 - 649226 | 31795.6 |
| imidazolonepropionase-like amidohydrolase | B0O44_101535 | Not Available | Negative | 649338 - 650621 | 45464.9 |
| hypothetical protein | B0O44_101536 | Not Available | Negative | 650697 - 652037 | 51124.6 |
| transcriptional regulator glxa family with amidase domain | B0O44_101537 | Not Available | Positive | 652160 - 653083 | 34423.6 |
| dj-1/pfpi family protein | B0O44_101538 | Not Available | Positive | 653149 - 653922 | 28087.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

