Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | B0O44_101509 | Not Available | Positive | 619271 - 619789 | 19904.8 |
| susd-like starch-binding protein associating with outer membrane | B0O44_101510 | Not Available | Negative | 619846 - 621453 | 57623.2 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101511 | Not Available | Negative | 621472 - 624579 | 113927.0 |
| dna-binding lytr/algr family response regulator | B0O44_101512 | Not Available | Positive | 625136 - 626020 | 34573.5 |
| agmatine deiminase | B0O44_101513 | Not Available | Negative | 626058 - 627176 | 41925.9 |
| arac family transcriptional regulator | B0O44_101514 | Not Available | Negative | 627247 - 628074 | 32636.1 |
| arac-like dna-binding protein | B0O44_101515 | Not Available | Positive | 628248 - 629096 | 33351.8 |
| pimeloyl-acp methyl ester carboxylesterase | B0O44_101516 | Not Available | Positive | 629125 - 629982 | 30791.0 |
| putative mfs family arabinose efflux permease | B0O44_101517 | Not Available | Negative | 630021 - 631244 | 43251.9 |
| arac-like protein | B0O44_101518 | Not Available | Negative | 631340 - 632173 | 31577.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

