Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | B0O44_101489 | Not Available | Positive | 601545 - 602288 | 28228.3 |
| Trna-lys | Not Available | Not Available | Positive | 602359 - 602431 | Not Available |
| uncharacterized protein duf3667 | B0O44_101491 | Not Available | Positive | 602524 - 603264 | 28826.7 |
| hypothetical protein | B0O44_101492 | Not Available | Negative | 603293 - 604201 | 32699.5 |
| transglutaminase-like putative cysteine protease | B0O44_101493 | Not Available | Negative | 604579 - 605709 | 43105.0 |
| hypothetical protein | B0O44_101494 | Not Available | Negative | 605866 - 606495 | 23972.2 |
| helix-turn-helix protein | B0O44_101495 | Not Available | Positive | 606895 - 608034 | 43952.4 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_101496 | Not Available | Positive | 608187 - 609653 | 55086.1 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | B0O44_101497 | Not Available | Negative | 609783 - 610190 | 15034.1 |
| putative dna-binding transcriptional regulator yafy | B0O44_101498 | Not Available | Negative | 610231 - 610965 | 28020.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

