Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 5707119 - 5707193 | Not Available |
| hypothetical protein | B0O44_1171 | Not Available | Positive | 5709131 - 5709360 | 8610.17 |
| fic family protein | B0O44_1172 | Not Available | Negative | 5709262 - 5710377 | 42516.1 |
| transposase | B0O44_1181 | Not Available | Positive | 5711095 - 5712693 | 61559.9 |
| plasmid stabilization system protein pare | B0O44_1201 | Not Available | Negative | 5714843 - 5715130 | 11019.4 |
| hypothetical protein | B0O44_1202 | Not Available | Negative | 5715127 - 5715333 | 7667.54 |
| hypothetical protein | B0O44_1211 | Not Available | Positive | 5715757 - 5715969 | 7921.48 |
| hypothetical protein | B0O44_1212 | Not Available | Negative | 5716045 - 5716578 | 20771.3 |
| pd-(d/e)xk nuclease-like transposase | B0O44_1213 | Not Available | Positive | 5716763 - 5716991 | 8636.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

