Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase n-terminal domain/subunit | B0O44_11413 | Not Available | Negative | 5696217 - 5697764 | 57096.0 |
| hypothetical protein | B0O44_11414 | Not Available | Negative | 5697767 - 5698300 | 20168.5 |
| iron-sulfur cluster assembly protein | B0O44_11415 | Not Available | Positive | 5698390 - 5698743 | 12808.1 |
| putative abc transport system permease protein | B0O44_11416 | Not Available | Positive | 5698845 - 5700074 | 43769.2 |
| dtdp-glucose 4,6-dehydratase | B0O44_11417 | Not Available | Negative | 5700150 - 5701202 | 39589.2 |
| hypothetical protein | B0O44_11418 | Not Available | Negative | 5701205 - 5701771 | 21908.8 |
| udp-glucose 4-epimerase | B0O44_11419 | Not Available | Negative | 5701772 - 5702791 | 37512.7 |
| dtdp-glucose 4,6-dehydratase | B0O44_11420 | Not Available | Negative | 5702793 - 5703782 | 37422.0 |
| udpglucose 6-dehydrogenase | B0O44_11421 | Not Available | Negative | 5703782 - 5703913 | 5077.05 |
| Trna-ala | Not Available | Not Available | Positive | 5707030 - 5707106 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

