Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family two component transcriptional regulator | B0O44_11323 | Not Available | Negative | 5678291 - 5679007 | 27564.8 |
| histidine kinase | B0O44_11324 | Not Available | Negative | 5679012 - 5680067 | 40938.1 |
| outer membrane receptor protein involved in fe transport | B0O44_11325 | Not Available | Positive | 5680288 - 5682780 | 94322.5 |
| Trna-met | Not Available | Not Available | Positive | 5683127 - 5683203 | Not Available |
| integrase-like protein | B0O44_11327 | Not Available | Positive | 5683385 - 5684683 | 50217.7 |
| hypothetical protein | B0O44_11328 | Not Available | Positive | 5684761 - 5684907 | 5411.05 |
| hypothetical protein | B0O44_11329 | Not Available | Negative | 5684924 - 5685460 | 20254.6 |
| hypothetical protein | B0O44_11330 | Not Available | Positive | 5685694 - 5685921 | 8209.69 |
| hypothetical protein | B0O44_1141 | Not Available | Negative | 5686670 - 5687395 | 26739.1 |
| dna-binding transcriptional regulator yhcf (gntr family) | B0O44_1142 | Not Available | Negative | 5687456 - 5687824 | 14460.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

