Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | B0O44_11313 | Not Available | Negative | 5669305 - 5670201 | 34892.6 |
| 3-dehydroquinate synthase | B0O44_11314 | Not Available | Negative | 5670191 - 5671255 | 39494.4 |
| ribosome-associated protein | B0O44_11315 | Not Available | Negative | 5671255 - 5671461 | 7583.41 |
| l-proline dehydrogenase | B0O44_11316 | Not Available | Positive | 5671557 - 5672741 | 45388.5 |
| bleomycin hydrolase | B0O44_11317 | Not Available | Positive | 5672774 - 5673877 | 41313.2 |
| nucleoside-diphosphate-sugar epimerase | B0O44_11318 | Not Available | Negative | 5673915 - 5674850 | 35048.2 |
| crp-like camp-binding protein | B0O44_11319 | Not Available | Negative | 5674931 - 5675548 | 23891.8 |
| catalase | B0O44_11320 | Not Available | Negative | 5675642 - 5677150 | 57713.0 |
| hypothetical protein | B0O44_11321 | Not Available | Negative | 5677243 - 5677563 | 12386.2 |
| putative hydrolase of the had superfamily | B0O44_11322 | Not Available | Negative | 5677569 - 5678204 | 24728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

