Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_11262 | Not Available | Positive | 5640817 - 5641227 | 15591.4 |
| hypothetical protein | B0O44_11263 | Not Available | Positive | 5641300 - 5641674 | 14427.5 |
| dna polymerase v | B0O44_11264 | Not Available | Positive | 5641833 - 5642264 | 16108.4 |
| dna polymerase v | B0O44_11265 | Not Available | Positive | 5642261 - 5643526 | 47467.8 |
| putative sos response-associated peptidase yedk | B0O44_11266 | Not Available | Negative | 5643798 - 5644574 | 29850.5 |
| hypothetical protein | B0O44_11267 | Not Available | Negative | 5644564 - 5644842 | 10727.1 |
| hypothetical protein | B0O44_11268 | Not Available | Positive | 5645028 - 5645252 | 8497.31 |
| uncharacterized protein yece (duf72 family) | B0O44_11269 | Not Available | Positive | 5645293 - 5646201 | 35048.9 |
| hypothetical protein | B0O44_11270 | Not Available | Positive | 5646500 - 5646871 | 14317.3 |
| dna invertase pin-like site-specific dna recombinase | B0O44_11271 | Not Available | Positive | 5647036 - 5647647 | 23025.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

