Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional repressor for pyruvate dehydrogenase complex | B0O44_101479 | Not Available | Positive | 586680 - 587459 | 29034.2 |
| alginate lyase | B0O44_101480 | Not Available | Positive | 587513 - 589648 | 79775.2 |
| quercetin dioxygenase-like cupin family protein | B0O44_101481 | Not Available | Positive | 589655 - 589990 | 12701.1 |
| acetyl esterase/lipase | B0O44_101482 | Not Available | Positive | 590021 - 590893 | 32060.7 |
| acs family hexuronate transporter-like mfs transporter | B0O44_101483 | Not Available | Positive | 590906 - 592180 | 47256.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | B0O44_101484 | Not Available | Positive | 592197 - 592949 | 26298.6 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101485 | Not Available | Positive | 593094 - 596297 | 118386.0 |
| putative outer membrane starch-binding protein | B0O44_101486 | Not Available | Positive | 596314 - 597906 | 58921.1 |
| hypothetical protein | B0O44_101487 | Not Available | Positive | 597928 - 599214 | 46608.7 |
| poly(beta-d-mannuronate) lyase | B0O44_101488 | Not Available | Positive | 599221 - 601536 | 84989.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

