Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemoreceptor-like protein with four helix bundle sensory module | B0O44_111160 | Not Available | Positive | 5559999 - 5560688 | 26145.3 |
| signal transduction histidine kinase | B0O44_111161 | Not Available | Negative | 5560702 - 5562036 | 50800.0 |
| dinb family protein | B0O44_111162 | Not Available | Positive | 5562121 - 5562594 | 18041.9 |
| moxr-like atpase | B0O44_111163 | Not Available | Positive | 5563219 - 5564247 | 38635.2 |
| uncharacterized protein duf58 | B0O44_111164 | Not Available | Positive | 5564252 - 5565127 | 33671.5 |
| hypothetical protein | B0O44_111165 | Not Available | Positive | 5565133 - 5566101 | 36778.7 |
| ca-activated chloride channel family protein | B0O44_111166 | Not Available | Positive | 5566094 - 5567098 | 37068.5 |
| ca-activated chloride channel family protein | B0O44_111167 | Not Available | Positive | 5567103 - 5568140 | 37932.3 |
| tpr repeat protein | B0O44_111168 | Not Available | Positive | 5568140 - 5568934 | 30780.2 |
| oxygen tolerance protein batd | B0O44_111169 | Not Available | Positive | 5568953 - 5570788 | 67226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

