Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fsr family fosmidomycin resistance protein-like mfs transporter | B0O44_111150 | Not Available | Positive | 5549415 - 5550623 | 43501.2 |
| atp-dependent clp protease atp-binding subunit clpb | B0O44_111151 | Not Available | Negative | 5550671 - 5553280 | 97666.7 |
| putative mfs family arabinose efflux permease | B0O44_111152 | Not Available | Positive | 5553669 - 5554883 | 44554.6 |
| hypothetical protein | B0O44_111153 | Not Available | Negative | 5554956 - 5555354 | 14568.6 |
| orotate phosphoribosyltransferase | B0O44_111154 | Not Available | Negative | 5555360 - 5556019 | 24223.9 |
| nudix domain-containing protein | B0O44_111155 | Not Available | Positive | 5556057 - 5556629 | 21753.8 |
| phosphopantetheine adenylyltransferase | B0O44_111156 | Not Available | Negative | 5556630 - 5557091 | 17567.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | B0O44_111157 | Not Available | Negative | 5557093 - 5557638 | 20248.5 |
| uncharacterized protein duf3822 | B0O44_111158 | Not Available | Negative | 5557629 - 5558456 | 31573.5 |
| exodeoxyribonuclease-5 | B0O44_111159 | Not Available | Positive | 5558510 - 5559958 | 54652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

