Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase subunit of abc transporter with duplicated atpase domains | B0O44_111140 | Not Available | Negative | 5536395 - 5538017 | 61276.9 |
| hypothetical protein | B0O44_111141 | Not Available | Positive | 5538101 - 5538670 | 21985.0 |
| nitroreductase | B0O44_111142 | Not Available | Positive | 5538717 - 5539295 | 22047.2 |
| hypothetical protein | B0O44_111143 | Not Available | Positive | 5539299 - 5539751 | 16696.8 |
| polysaccharide deacetylase | B0O44_111144 | Not Available | Negative | 5539798 - 5540682 | 33474.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | B0O44_111145 | Not Available | Positive | 5540790 - 5543306 | 95919.6 |
| outer membrane protein with beta-barrel domain | B0O44_111146 | Not Available | Negative | 5543377 - 5543979 | 21040.2 |
| putative gh43/duf377 family glycosyl hydrolase | B0O44_111147 | Not Available | Positive | 5544379 - 5545857 | 56646.0 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_111148 | Not Available | Negative | 5545854 - 5546861 | 37560.0 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_111149 | Not Available | Negative | 5546873 - 5549140 | 86666.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

