Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_101469 | Not Available | Negative | 574293 - 574898 | 23744.8 |
| tonb-linked susc/raga family outer membrane protein | B0O44_101470 | Not Available | Positive | 575415 - 578570 | 113625.0 |
| putative outer membrane starch-binding protein | B0O44_101471 | Not Available | Positive | 578590 - 580041 | 54183.8 |
| putative mfs family arabinose efflux permease | B0O44_101472 | Not Available | Negative | 580090 - 581382 | 46964.3 |
| hypothetical protein | B0O44_101473 | Not Available | Negative | 581388 - 581612 | 8735.36 |
| tetr family transcriptional regulator | B0O44_101474 | Not Available | Negative | 581639 - 582265 | 23660.8 |
| nramp (natural resistance-associated macrophage protein)-like metal ion transporter | B0O44_101475 | Not Available | Positive | 582407 - 583705 | 46934.2 |
| hypothetical protein | B0O44_101476 | Not Available | Positive | 583774 - 584628 | 31105.7 |
| dna-binding transcriptional lysr family regulator | B0O44_101477 | Not Available | Positive | 584758 - 585648 | 34259.3 |
| myo-inositol-1(or 4)-monophosphatase | B0O44_101478 | Not Available | Positive | 585783 - 586580 | 30010.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

