Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent deacetylase | B0O44_111130 | Not Available | Negative | 5527481 - 5528185 | 26122.5 |
| lysozyme | B0O44_111131 | Not Available | Negative | 5528203 - 5529093 | 34501.1 |
| hypothetical protein | B0O44_111132 | Not Available | Positive | 5529171 - 5531183 | 77027.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | B0O44_111133 | Not Available | Positive | 5531195 - 5531695 | 17998.0 |
| fur family ferric uptake transcriptional regulator | B0O44_111134 | Not Available | Negative | 5531773 - 5532204 | 16175.7 |
| hypothetical protein | B0O44_111135 | Not Available | Negative | 5532213 - 5532650 | 16196.1 |
| putative abc transport system permease protein | B0O44_111136 | Not Available | Negative | 5532676 - 5533860 | 43302.9 |
| putative abc transport system atp-binding protein | B0O44_111137 | Not Available | Negative | 5533887 - 5534516 | 23316.3 |
| merc mercury resistance protein | B0O44_111138 | Not Available | Negative | 5534617 - 5535000 | 14028.7 |
| g3e family gtpase | B0O44_111139 | Not Available | Positive | 5535073 - 5536281 | 45921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

