Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuine trna-ribosyltransferase | B0O44_111120 | Not Available | Negative | 5514259 - 5515389 | 42282.1 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | B0O44_111121 | Not Available | Positive | 5515521 - 5516642 | 42878.0 |
| 16s rrna (guanine527-n7)-methyltransferase | B0O44_111122 | Not Available | Positive | 5516633 - 5517265 | 24008.0 |
| dna processing protein | B0O44_111123 | Not Available | Positive | 5517489 - 5518592 | 40069.8 |
| cystathionine beta-synthase | B0O44_111124 | Not Available | Positive | 5518744 - 5520105 | 50058.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | B0O44_111125 | Not Available | Negative | 5520159 - 5521484 | 48303.2 |
| uncharacterized protein duf4290 | B0O44_111126 | Not Available | Negative | 5521511 - 5522176 | 25827.7 |
| dna helicase-2/atp-dependent dna helicase pcra | B0O44_111127 | Not Available | Negative | 5522286 - 5524592 | 87496.1 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein | B0O44_111128 | Not Available | Positive | 5524912 - 5526282 | 50429.2 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | B0O44_111129 | Not Available | Positive | 5526373 - 5527491 | 41789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

