Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secd/secf fusion protein | B0O44_111110 | Not Available | Negative | 5501119 - 5504058 | 106779.0 |
| dihydrofolate reductase | B0O44_111111 | Not Available | Negative | 5504170 - 5504655 | 18019.4 |
| thymidylate synthase | B0O44_111112 | Not Available | Negative | 5504652 - 5505446 | 30120.2 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | B0O44_111113 | Not Available | Positive | 5505624 - 5506427 | 29097.3 |
| putative redox protein | B0O44_111114 | Not Available | Positive | 5506437 - 5506853 | 15529.8 |
| o-succinylhomoserine sulfhydrylase | B0O44_111115 | Not Available | Positive | 5506858 - 5508024 | 42979.6 |
| hypothetical protein | B0O44_111116 | Not Available | Negative | 5508017 - 5508295 | 10686.9 |
| hypothetical protein | B0O44_111117 | Not Available | Negative | 5508299 - 5511109 | 107057.0 |
| eama-like transporter family protein | B0O44_111118 | Not Available | Negative | 5512269 - 5513153 | 32937.4 |
| lipopolysaccharide export system permease protein | B0O44_111119 | Not Available | Negative | 5513155 - 5514258 | 42192.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

