Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | B0O44_11180 | Not Available | Positive | 5466150 - 5467730 | 60255.0 |
| uncharacterized protein duf5118 | B0O44_11181 | Not Available | Positive | 5467900 - 5470539 | 98949.4 |
| tonb-linked susc/raga family outer membrane protein | B0O44_11182 | Not Available | Positive | 5470565 - 5473924 | 124430.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_11183 | Not Available | Positive | 5473936 - 5475261 | 49709.2 |
| lyttr family two component transcriptional regulator | B0O44_11184 | Not Available | Positive | 5475358 - 5476080 | 27494.4 |
| drug/metabolite transporter (dmt)-like permease | B0O44_11185 | Not Available | Positive | 5476174 - 5479164 | 112658.0 |
| beta-lactamase class a | B0O44_11186 | Not Available | Negative | 5479161 - 5480144 | 36413.2 |
| uncharacterized protein duf3276 | B0O44_11187 | Not Available | Negative | 5480150 - 5480476 | 12797.8 |
| atp-binding cassette subfamily b protein | B0O44_11188 | Not Available | Negative | 5480670 - 5482469 | 68034.4 |
| glutamate dehydrogenase/leucine dehydrogenase | B0O44_11189 | Not Available | Positive | 5482583 - 5483671 | 39324.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

