Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu+-exporting atpase | B0O44_11170 | Not Available | Negative | 5455111 - 5457513 | 88642.5 |
| undecaprenyl-diphosphatase | B0O44_11171 | Not Available | Positive | 5457650 - 5458279 | 23648.2 |
| putative zinc-type alcohol dehydrogenase-like protein | B0O44_11172 | Not Available | Negative | 5458335 - 5459381 | 38229.6 |
| putative transcriptional regulator | B0O44_11173 | Not Available | Negative | 5459477 - 5459677 | 7523.26 |
| hypothetical protein | B0O44_11174 | Not Available | Negative | 5459667 - 5460122 | 17594.8 |
| n-acetylglutamate synthase-like gnat family acetyltransferase | B0O44_11175 | Not Available | Positive | 5460295 - 5460792 | 18937.1 |
| dna-binding marr family transcriptional regulator | B0O44_11176 | Not Available | Positive | 5460854 - 5461330 | 18560.7 |
| small-conductance mechanosensitive channel | B0O44_11177 | Not Available | Positive | 5461362 - 5463791 | 91519.0 |
| hypothetical protein | B0O44_11178 | Not Available | Negative | 5464014 - 5464637 | 23376.4 |
| poly(beta-d-mannuronate) lyase | B0O44_11179 | Not Available | Positive | 5464789 - 5466114 | 47824.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

