Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp-like camp-binding protein | B0O44_11160 | Not Available | Positive | 5446280 - 5447338 | 39977.8 |
| d-lactate dehydrogenase | B0O44_11161 | Not Available | Positive | 5447418 - 5447882 | 16931.0 |
| oxygen-independent coproporphyrinogen-3 oxidase | B0O44_11162 | Not Available | Positive | 5447872 - 5449236 | 51671.7 |
| hypothetical protein | B0O44_11163 | Not Available | Negative | 5449245 - 5449931 | 24202.6 |
| hypothetical protein | B0O44_11164 | Not Available | Negative | 5449928 - 5450365 | 17008.8 |
| cytochrome c oxidase accessory protein fixg | B0O44_11165 | Not Available | Negative | 5450358 - 5451755 | 53683.6 |
| cytochrome c oxidase cbb3-type subunit 3 | B0O44_11166 | Not Available | Negative | 5451757 - 5452560 | 29649.8 |
| hypothetical protein | B0O44_11167 | Not Available | Negative | 5452565 - 5452732 | 6611.33 |
| cytochrome c oxidase cbb3-type subunit i/ii | B0O44_11168 | Not Available | Negative | 5452744 - 5454855 | 80180.1 |
| cbb3-type cytochrome oxidase maturation protein | B0O44_11169 | Not Available | Negative | 5454932 - 5455114 | 6959.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

