Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_11140 | Not Available | Negative | 5424291 - 5424695 | 16308.0 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | B0O44_11141 | Not Available | Positive | 5425068 - 5426396 | 48664.3 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | B0O44_11142 | Not Available | Positive | 5426400 - 5427419 | 37826.1 |
| had superfamily hydrolase (tigr01509 family) | B0O44_11143 | Not Available | Positive | 5427438 - 5428052 | 22141.7 |
| virulence protein virj | B0O44_11144 | Not Available | Positive | 5428200 - 5428967 | 29016.2 |
| virulence protein virj | B0O44_11145 | Not Available | Positive | 5428983 - 5429669 | 25499.8 |
| phosphatidylglycerol lysyltransferase | B0O44_11146 | Not Available | Negative | 5429677 - 5432265 | 97276.6 |
| dolichol-phosphate mannosyltransferase | B0O44_11147 | Not Available | Positive | 5432441 - 5433376 | 35731.5 |
| uncharacterized protein duf3473 | B0O44_11148 | Not Available | Positive | 5433376 - 5434149 | 30341.3 |
| putative flippase gtra | B0O44_11149 | Not Available | Negative | 5434124 - 5434606 | 18529.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

