Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykoy family integral membrane protein | B0O44_11130 | Not Available | Positive | 5411187 - 5411966 | 29165.6 |
| tetr family transcriptional regulator | B0O44_11131 | Not Available | Positive | 5412009 - 5412686 | 26217.0 |
| membrane fusion protein (multidrug efflux system) | B0O44_11132 | Not Available | Positive | 5412844 - 5414040 | 42625.5 |
| hae1 family hydrophobic/amphiphilic exporter-1 | B0O44_11133 | Not Available | Positive | 5414065 - 5417280 | 116324.0 |
| outer membrane efflux protein | B0O44_11134 | Not Available | Positive | 5417297 - 5417839 | 19680.4 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | B0O44_11135 | Not Available | Positive | 5417858 - 5418709 | 30920.5 |
| pas domain s-box-containing protein | B0O44_11136 | Not Available | Negative | 5418721 - 5421351 | 99351.7 |
| glucokinase | B0O44_11137 | Not Available | Positive | 5421584 - 5422450 | 32058.6 |
| putative mfs family arabinose efflux permease | B0O44_11138 | Not Available | Positive | 5422450 - 5423655 | 44547.6 |
| hypothetical protein | B0O44_11139 | Not Available | Negative | 5423774 - 5424247 | 18244.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

