Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_11110 | Not Available | Positive | 5389778 - 5390161 | 15034.2 |
| activator of hsp90 atpase-like protein | B0O44_11111 | Not Available | Negative | 5390292 - 5390906 | 23733.4 |
| hypothetical protein | B0O44_11112 | Not Available | Positive | 5390908 - 5391030 | 4763.14 |
| hypothetical protein | B0O44_11113 | Not Available | Positive | 5391027 - 5391197 | 6716.12 |
| hypothetical protein | B0O44_11114 | Not Available | Positive | 5391300 - 5391794 | 18376.8 |
| abc-type lipoprotein release transport system permease subunit | B0O44_11115 | Not Available | Negative | 5391842 - 5394220 | 89076.7 |
| l,d-transpeptidase-like protein | B0O44_11116 | Not Available | Positive | 5394410 - 5395903 | 56028.8 |
| alkylated dna repair dioxygenase alkb | B0O44_11117 | Not Available | Positive | 5395937 - 5396542 | 23403.1 |
| tetr family transcriptional regulator | B0O44_11118 | Not Available | Positive | 5396651 - 5397259 | 23177.2 |
| putative oxidoreductase | B0O44_11119 | Not Available | Positive | 5397314 - 5397748 | 15839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

