Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | B0O44_110167 | Not Available | Positive | 5364857 - 5365789 | 34345.0 |
| tetratricopeptide repeat protein | B0O44_110168 | Not Available | Positive | 5365921 - 5368938 | 115018.0 |
| hypothetical protein | B0O44_110169 | Not Available | Positive | 5368951 - 5370657 | 63436.0 |
| hypothetical protein | B0O44_110170 | Not Available | Positive | 5370712 - 5371980 | 47042.0 |
| biopolymer transport protein exbb | B0O44_110171 | Not Available | Positive | 5371982 - 5372692 | 25818.4 |
| biopolymer transport protein exbd | B0O44_110172 | Not Available | Positive | 5372692 - 5373093 | 14882.4 |
| hypothetical protein | B0O44_110173 | Not Available | Positive | 5373093 - 5373908 | 28696.0 |
| dihydrofolate synthase/folylpolyglutamate synthase | B0O44_110174 | Not Available | Positive | 5373934 - 5375220 | 47387.8 |
| type i phosphodiesterase/nucleotide pyrophosphatase | B0O44_110175 | Not Available | Positive | 5375294 - 5376961 | 61904.6 |
| methylmalonyl-coa mutase | B0O44_110176 | Not Available | Positive | 5377032 - 5380421 | 126622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

