Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmotically inducible protein osmc | B0O44_110157 | Not Available | Negative | 5355634 - 5356071 | 15227.0 |
| acetolactate synthase small subunit | B0O44_110158 | Not Available | Positive | 5356475 - 5356972 | 18706.7 |
| hypothetical protein | B0O44_110159 | Not Available | Positive | 5356985 - 5357221 | 8881.74 |
| glutamine transport system substrate-binding protein | B0O44_110160 | Not Available | Negative | 5357206 - 5357886 | 25940.8 |
| putative membrane protein | B0O44_110161 | Not Available | Negative | 5358020 - 5358616 | 22578.9 |
| putative iron-regulated membrane protein | B0O44_110162 | Not Available | Positive | 5358838 - 5360046 | 45931.9 |
| small subunit ribosomal protein s1 | B0O44_110163 | Not Available | Positive | 5360168 - 5362102 | 71850.4 |
| hexosaminidase | B0O44_110164 | Not Available | Positive | 5362186 - 5363790 | 61067.4 |
| putative dcc family thiol-disulfide oxidoreductase yuxk | B0O44_110165 | Not Available | Negative | 5363791 - 5364186 | 15291.7 |
| pyrimidine operon attenuation protein/uracil phosphoribosyltransferase | B0O44_110166 | Not Available | Positive | 5364306 - 5364854 | 20988.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

