Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_110147 | Not Available | Positive | 5342911 - 5343438 | 20268.3 |
| outer membrane lipoprotein yfio | B0O44_110148 | Not Available | Negative | 5343500 - 5344126 | 23398.1 |
| atp-dependent lon protease | B0O44_110149 | Not Available | Positive | 5344407 - 5346878 | 92032.5 |
| hypothetical protein | B0O44_110150 | Not Available | Positive | 5346947 - 5347903 | 35652.1 |
| ribosome-associated protein | B0O44_110151 | Not Available | Negative | 5347931 - 5348344 | 15612.3 |
| cytidylate kinase | B0O44_110152 | Not Available | Positive | 5348486 - 5349163 | 25581.6 |
| membrane fusion protein (multidrug efflux system) | B0O44_110153 | Not Available | Positive | 5349297 - 5350481 | 42416.1 |
| hae1 family hydrophobic/amphiphilic exporter-1 | B0O44_110154 | Not Available | Positive | 5350530 - 5353706 | 114544.0 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | B0O44_110155 | Not Available | Positive | 5353717 - 5355123 | 51241.0 |
| hypothetical protein | B0O44_110156 | Not Available | Positive | 5355187 - 5355597 | 16066.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

