Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4294 | B0O44_110137 | Not Available | Negative | 5331908 - 5332537 | 24019.5 |
| gtp pyrophosphokinase | B0O44_110138 | Not Available | Positive | 5332776 - 5334986 | 83898.6 |
| fur family ferric uptake transcriptional regulator | B0O44_110139 | Not Available | Positive | 5335050 - 5335538 | 18897.6 |
| adenylosuccinate synthetase | B0O44_110140 | Not Available | Positive | 5335650 - 5336927 | 46668.3 |
| para-aminobenzoate synthetase component 1 | B0O44_110141 | Not Available | Positive | 5336961 - 5338277 | 49036.8 |
| peptidase m48-like protein | B0O44_110142 | Not Available | Negative | 5338301 - 5339134 | 29556.2 |
| glycerol-3-phosphate acyltransferase plsy | B0O44_110143 | Not Available | Negative | 5339146 - 5339790 | 23126.0 |
| nicotinate-nucleotide pyrophosphorylase | B0O44_110144 | Not Available | Negative | 5339794 - 5340636 | 30808.3 |
| uncharacterized protein duf4783 | B0O44_110145 | Not Available | Negative | 5340730 - 5341125 | 14865.0 |
| phosphoglycerate mutase | B0O44_110146 | Not Available | Positive | 5341391 - 5342911 | 55786.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

