Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein ydei (yjbr/cyay-like superfamily) | B0O44_110127 | Not Available | Positive | 5318123 - 5318701 | 22406.1 |
| fad dependent oxidoreductase | B0O44_110128 | Not Available | Negative | 5318770 - 5320770 | 73781.5 |
| putative outer membrane starch-binding protein | B0O44_110129 | Not Available | Negative | 5320773 - 5322455 | 63189.0 |
| tonb-linked susc/raga family outer membrane protein | B0O44_110130 | Not Available | Negative | 5322467 - 5325799 | 121326.0 |
| fecr family protein | B0O44_110131 | Not Available | Negative | 5325875 - 5326996 | 41918.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_110132 | Not Available | Negative | 5327040 - 5327579 | 21032.6 |
| 4-aminobutyrate aminotransferase/l-lysine 6-transaminase,tigr03251 | B0O44_110133 | Not Available | Positive | 5327872 - 5329203 | 50106.2 |
| glutaryl-coa dehydrogenase | B0O44_110134 | Not Available | Negative | 5329264 - 5330625 | 50714.5 |
| bacillithiol biosynthesis deacetylase bshb1 | B0O44_110135 | Not Available | Negative | 5330678 - 5331394 | 26776.8 |
| glutathione peroxidase | B0O44_110136 | Not Available | Negative | 5331403 - 5331903 | 19234.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

