Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1-like esterase | B0O44_110107 | Not Available | Negative | 5292067 - 5293515 | 53466.6 |
| hypothetical protein | B0O44_110108 | Not Available | Negative | 5293515 - 5296961 | 127378.0 |
| hypothetical protein | B0O44_110109 | Not Available | Negative | 5296964 - 5299588 | 98303.1 |
| uncharacterized protein duf5017 | B0O44_110110 | Not Available | Negative | 5299602 - 5300483 | 32211.0 |
| putative outer membrane starch-binding protein | B0O44_110111 | Not Available | Negative | 5300509 - 5302116 | 60374.8 |
| tonb-linked susc/raga family outer membrane protein | B0O44_110112 | Not Available | Negative | 5302127 - 5305276 | 115790.0 |
| beta-glucosidase | B0O44_110113 | Not Available | Negative | 5305345 - 5307933 | 95645.5 |
| substrate-binding family protein | B0O44_110114 | Not Available | Positive | 5308165 - 5309214 | 40286.6 |
| hypothetical protein | B0O44_110115 | Not Available | Positive | 5309272 - 5309637 | 14319.9 |
| hypothetical protein | B0O44_110116 | Not Available | Negative | 5309724 - 5310260 | 19475.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

