Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-aminocyclopropane-1-carboxylate deaminase | B0O44_11097 | Not Available | Positive | 5279921 - 5280802 | 32711.8 |
| acetyl esterase/lipase | B0O44_11098 | Not Available | Positive | 5280909 - 5282444 | 58547.0 |
| patatin-like phospholipase | B0O44_11099 | Not Available | Positive | 5282531 - 5283589 | 39337.6 |
| lyttr family two component transcriptional regulator | B0O44_110100 | Not Available | Negative | 5283596 - 5284324 | 28301.4 |
| histidine kinase | B0O44_110101 | Not Available | Negative | 5284321 - 5285403 | 41993.8 |
| hypothetical protein | B0O44_110102 | Not Available | Positive | 5285622 - 5286302 | 25271.4 |
| putative membrane protein | B0O44_110103 | Not Available | Positive | 5286414 - 5287001 | 20713.9 |
| sss family transporter | B0O44_110104 | Not Available | Negative | 5287117 - 5288802 | 60869.3 |
| fad dependent oxidoreductase | B0O44_110105 | Not Available | Negative | 5288829 - 5291108 | 84464.2 |
| uncharacterized protein duf4886 | B0O44_110106 | Not Available | Negative | 5291151 - 5292050 | 33982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

