Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_11087 | Not Available | Positive | 5268041 - 5268487 | 16406.2 |
| prolyl oligopeptidase family protein | B0O44_11088 | Not Available | Positive | 5268595 - 5271003 | 89002.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | B0O44_11089 | Not Available | Positive | 5271121 - 5272635 | 58839.5 |
| lipoprotein-releasing system permease protein | B0O44_11090 | Not Available | Negative | 5272638 - 5273867 | 46117.4 |
| uncharacterized protein ybbc (duf1343 family) | B0O44_11091 | Not Available | Positive | 5273949 - 5275193 | 46029.8 |
| hypothetical protein | B0O44_11092 | Not Available | Negative | 5275259 - 5275618 | 13669.7 |
| dna topoisomerase-1 | B0O44_11093 | Not Available | Negative | 5275679 - 5276737 | 40238.6 |
| methionyl-trna formyltransferase | B0O44_11094 | Not Available | Positive | 5276842 - 5277750 | 33250.3 |
| branched-chain amino acid aminotransferase | B0O44_11095 | Not Available | Negative | 5277747 - 5278595 | 31756.4 |
| rlua family pseudouridine synthase | B0O44_11096 | Not Available | Negative | 5278599 - 5279630 | 39136.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

