Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl-peptidase-4 | B0O44_11077 | Not Available | Negative | 5255561 - 5257714 | 80663.0 |
| putative endopeptidase | B0O44_11078 | Not Available | Positive | 5258369 - 5260408 | 75928.5 |
| lyttr family two component transcriptional regulator | B0O44_11079 | Not Available | Negative | 5260467 - 5261162 | 26023.2 |
| peptidase m16-like protein | B0O44_11080 | Not Available | Positive | 5261336 - 5261950 | 21665.9 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | B0O44_11081 | Not Available | Positive | 5262103 - 5262777 | 25035.0 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | B0O44_11082 | Not Available | Positive | 5262927 - 5263877 | 35588.1 |
| putative purr-regulated permease perm | B0O44_11083 | Not Available | Positive | 5264166 - 5265278 | 41473.9 |
| xtp/ditp diphosphohydrolase | B0O44_11084 | Not Available | Positive | 5265310 - 5266116 | 30876.6 |
| atp-dependent rna helicase rhle | B0O44_11085 | Not Available | Negative | 5266113 - 5267411 | 47864.3 |
| hypothetical protein | B0O44_11086 | Not Available | Positive | 5267518 - 5267979 | 17039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

