Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nhap-type na+/h+ or k+/h+ antiporter | B0O44_11067 | Not Available | Positive | 5239408 - 5240601 | 43897.3 |
| putative rna-binding protein with pua-like domain | B0O44_11068 | Not Available | Negative | 5240647 - 5241060 | 15999.0 |
| transcriptional regulator glxa family with amidase domain | B0O44_11069 | Not Available | Negative | 5241191 - 5242174 | 36867.4 |
| uncharacterized protein duf5118 | B0O44_11070 | Not Available | Negative | 5242425 - 5244989 | 94133.2 |
| dna polymerase iii delta subunit | B0O44_11071 | Not Available | Negative | 5245239 - 5246264 | 39294.4 |
| type i restriction and modification enzyme subunit r-like protein | B0O44_11072 | Not Available | Positive | 5246321 - 5246782 | 17952.1 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | B0O44_11073 | Not Available | Negative | 5246797 - 5248176 | 50720.1 |
| hae1 family hydrophobic/amphiphilic exporter-1 | B0O44_11074 | Not Available | Negative | 5248185 - 5251358 | 114869.0 |
| membrane fusion protein (multidrug efflux system) | B0O44_11075 | Not Available | Negative | 5251364 - 5252512 | 40912.1 |
| valyl-trna synthetase | B0O44_11076 | Not Available | Negative | 5252816 - 5255482 | 101748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

