Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | B0O44_11037 | Not Available | Negative | 5202822 - 5206016 | 114815.0 |
| sec-independent protein translocase protein tata | B0O44_11038 | Not Available | Positive | 5206315 - 5206551 | 8550.55 |
| hypothetical protein | B0O44_11039 | Not Available | Negative | 5206596 - 5206877 | 11062.1 |
| dna-binding response ompr family regulator | B0O44_11040 | Not Available | Positive | 5206922 - 5207602 | 25654.4 |
| signal transduction histidine kinase | B0O44_11041 | Not Available | Positive | 5207607 - 5208965 | 51998.3 |
| cobalt-zinc-cadmium efflux system outer membrane protein | B0O44_11042 | Not Available | Positive | 5209045 - 5210316 | 48197.8 |
| cobalt-zinc-cadmium efflux system membrane fusion protein | B0O44_11043 | Not Available | Positive | 5210326 - 5211423 | 40297.6 |
| cobalt-zinc-cadmium resistance protein czca | B0O44_11044 | Not Available | Positive | 5211451 - 5214585 | 116093.0 |
| putative membrane protein | B0O44_11045 | Not Available | Positive | 5214740 - 5215441 | 26618.3 |
| lyttr family two component transcriptional regulator | B0O44_11046 | Not Available | Negative | 5215448 - 5216191 | 28094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

